Package: redlistr 2.0.0

Aniko Toth

redlistr: Tools for the IUCN Red List of Ecosystems and Species

A toolbox created by members of the International Union for Conservation of Nature (IUCN) Red List of Ecosystems Committee for Scientific Standards. Primarily, it is a set of tools suitable for calculating the metrics required for making assessments of species and ecosystems against the IUCN Red List of Threatened Species and the IUCN Red List of Ecosystems categories and criteria. See the IUCN website for detailed guidelines, the criteria, publications and other information.

Authors:Calvin Lee [aut], Nicholas Murray [aut], Aniko Toth [cre, aut], José R. Ferrer-Paris [aut]

redlistr_2.0.0.tar.gz
redlistr_2.0.0.zip(r-4.7)redlistr_2.0.0.zip(r-4.6)redlistr_2.0.0.zip(r-4.5)
redlistr_2.0.0.tgz(r-4.6-any)redlistr_2.0.0.tgz(r-4.5-any)
redlistr_2.0.0.tar.gz(r-4.7-any)redlistr_2.0.0.tar.gz(r-4.6-any)
redlistr_2.0.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
redlistr/json (API)

# Install 'redlistr' in R:
install.packages('redlistr', repos = c('https://red-list-ecosystem.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/red-list-ecosystem/redlistr/issues

Pkgdown/docs site:https://red-list-ecosystem.github.io

Datasets:
  • a - Mangrove area combined
  • a.2000 - Mangrove distribution data
  • a.2017 - Mangrove area

On CRAN:

Conda:

7.58 score 38 stars 50 scripts 305 downloads 1 mentions 20 exports 44 dependencies

Last updated from:94cd15eba3. Checks:9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64OK245
source / vignettesOK237
linux-release-x86_64OK261
macos-release-arm64OK183
macos-oldrel-arm64OK166
windows-develOK186
windows-releaseOK187
windows-oldrelOK180
wasm-releaseOK179

Exports:bundledeclineForecastextrapolateEstimatefutureAreaEstimategetAOOgetAreagetAreaChangegetAreaEOOgetAreaTrendgetDeclineStatsgetEOOhistjplotlist2tablemakeAOOGridmakeEOOplotsequentialExtrapolateshowsummary

Dependencies:classclassIntclicpp11DBIdplyre1071farvergenericsggplot2gluegtableisobandKernSmoothlabelinglatticelifecyclemagrittrMASSMatrixmgcvnlmepillarpkgconfigproxyR6RColorBrewerRcpprlangs2S7scalessfstringistringrterratibbletidyselectunitsutf8vctrsviridisLitewithrwk

Calculating spatial metrics for IUCN RLE assessments
1. Introduction | 2. Importing data | Alternative formats | Plotting out data | 3. Basic information for the data | Rasters with multiple ecosystems or layers | 4. Assessing Criterion A | Area change | Rate of change | 4. Assessing Criterion B (distribution size) | Subcriterion B1 (calculating EOO) | Subcriterion B2 (calculating AOO) | Random grid search | One percent rule | 5. Final words
Rendered fromredlistr-vignette.Rmdusingknitr::rmarkdown

Last update: 2026-07-03
Started: 2016-07-19

Get started
What is this package for? | Input data formats | Outputs of the functions | Using redlistr | Elaborated examples
Rendered fromget-started.Rmdusingknitr::rmarkdown

Last update: 2026-07-03
Started: 2026-03-22

Readme and manuals

Help Manual

Help pageTopics
Mangrove area combineda
Mangrove distribution dataa.2000
Mangrove areaa.2017
AOOgrid classAOOgrid-class
AOOgrid as.listas.list.AOOgrid
EOO as.listas.list.EOO
Compute AOO and EOO, return as tablebundle
Create empty Area of Occupancy (AOO) Grid.createGrid
Decline forecastsdeclineForecast
EOO classEOO-class
Extrapolate EstimateextrapolateEstimate
Future Area EstimatefutureAreaEstimate
Compute Area of Occupancy (AOO)getAOO
Calculates the Area of ecosystems in spatial datagetArea
Area change between two inputs in km2getAreaChange
Extracts the area from an EOO polygongetAreaEOO
Calculate area trends of ecosystemsgetAreaTrend
Change statistics.getDeclineStats
Calculates area of the created EOO polygon and returns a summary object with useful info.getEOO
AOOgrid histhist,AOOgrid-method
Make elbow plot to check jitter iterationsjplot
Summarises a list of EOO or AOOgrid objects in a tablelist2table
Create Area of Occupancy (AOO) grid for an ecosystem or species distributionmakeAOOGrid
Creates Extent of occurrence (EOO) PolygonmakeEOO
AOOgrid plotplot,AOOgrid,ANY-method
EOO plotplot,EOO,ANY-method
trend plotplot,trend,ANY-method
Sequential extrapolation estimatesequentialExtrapolate
AOOgrid showshow,AOOgrid-method
EOO showshow,EOO-method
AOOgrid summarysummary,AOOgrid-method
EOO summarysummary,EOO-method
trend summarysummary,trend-method
Identify positions of the bottom 1% of ecosystem area in AOO gridtop_pct
Fit linear model with log-link.fit_glm_ll fit_lm_ll fit_spline trend_fitting_functions
trend classtrend-class